J Urol Oncol > Volume 22(2); 2024 > Article |
|
Grant/Fund Support
This research was support by the United States Department of Defense (DoD) Congressionally Directed Medical Research Programs (CDMRP) Prostate Cancer Research Program (PCRP) HEROIC Consortium Award PC210168 (HEROIC PCaPH Africa1K to VMH, MSRB, GSP and MPN) and partially by an Ideas Development Award PC200390 (TARGET Africa Project to VMH). Previously the Southern African Prostate Cancer (SAPCS) data collection has been supported by the Medical Research Council (MRC) of South Africa (to the late P.A. Venter, University of Limpopo, South Africa) and the Cancer Association of South Africa (CANSA to MSRB). VMH is supported by the Petre Foundation via the University of Sydney Foundation, Australia.
Research Ethics
Conforming to the principles of the Helsinki Declaration, patients were recruited as part of the Southern African Prostate Cancer Study (SAPCS) with approval granted by the University of Pretoria Faculty of Health Sciences Research Ethics Committee in South Africa (with US Federal wide assurance FWA00002567 and IRB00002235 IORG0001762; HREC#43/2010) and as initially approved by the Department of Health and Social Development, Limpopo Provincial Government Ethics Committee (#001/2008) and University of Limpopo Medunsa Research and Ethics Committee (#MREC/H/28/2009). Additional IRB review and approval for the SAPCS was granted by the Human Research Protection Office of the US Army Medical Research and Development Command E03333 (HEROIC PCaPH Africa1K) and E02371 (TARGET Africa). All individuals provided written informed consent to participate, including publication.
Author Contribution
VMH, MSRB and SBAM manage the SAPCS and conceptualised the review, with additional input from the DoD-funded HEROIC PCaPH Africa1K Steering Committee VMH, MSRB, MPN, GSP, SMP, WJ, DMM and WM). JS, SMP, MN, BR, and KG provided additional SAPCS data collections, clinicopathological confirmations and/or data curation, while WM, MOO, ICM and MPN provided additional perspectives of relevance across Sub-Saharan Africa. VMH performed the formal analyses, visualisation and wrote the original draft. Manuscript was reviewed by all authors.
Variable |
Rural (Limpopo) n=256 |
Urban (Gauteng) n=387 |
||
---|---|---|---|---|
Lifestyle data | TSH (n=58) | N (n=198) | SMU (n=279) | KAL (n=108) |
Ancestral identifier | 57 | 195 | 242 | 95 |
African (shared ancestry) | 54 (94.7) | 188 (96.4) | 114 (47.1) | 76 (80) |
African (mixed ancestry) | 3 (5.3) | 0 (0) | 31 (12.8) | 9 (9.5) |
African/non-African | 0 (0) | 0 (0) | 37 (15.3) | 1 (1.0) |
Non-African | 0 (0) | 7 (3.6) | 60 (24.8) | 9 (9.5) |
Place of birth | 58 | 198 | 279 | 108 |
Rural/urban match | 53 (91.4) | 147 (74.2) | 97 (34.8) | 52 (48.2) |
Rural/urban mismatch | 5 (8.6) | 14 (7.1) | 87 (31.2) | 28 (25.9) |
Other | 0 (0) | 37 (18.7) | 95 (34) | 28 (25.9) |
Lifetime residential location | 58 | 198 | 279 | 108 |
Rural/urban match | 53 (91.4) | 136 (68.7) | 70 (25.1) | 51 (47.2) |
Rural/urban mismatch | 0 (0) | 9 (4.5) | 28 (10) | 6 (5.6) |
Other | 5 (8.6) | 53 (26.8) | 181 (64.9) | 51 (47.2) |
Traditional circumcision | 57 | ND | 240 | 103 |
Yes | 51 (89.5) | - | 115 (47.9) | 53 (51.5) |
No | 6 (10.5) | - | 125 (52.1) | 50 (48.5) |
Genomic data | TSH (n=5) | N (n=19) | SMU (n=42) | KAL (n=16) |
Global mutational subtype | 5 | 18+1* | 41+1* | 14+2* |
GMS-A | 1 (20) | 13 (68.4) | 33 (78.6) | 10 (62.5) |
GMS-B | 0 (0) | 0 (0) | 8 (19) | 2 (12.5) |
GMS-C | 4 (80) | 5 (26.3) | 1 (2.4) | 0 (0) |
GMS-D | 0 (0) | 1 (5.3) | 0 (0) | 4 (25) |
Values are presented as number (%).
HEROIC PCaPH, Health Equity Research Outcomes and Improvement Consortium Prostate Cancer Precision Health; SAPCS, Southern African Prostate Cancer; TSH, Tshilidzini Hospital Vhembe (Limpopo); N, Polokwane Hospital (Limpopo); SMU, SMU Sefako Makgatho hospital (Gauteng); KAL, Kalafong Hospital (Gauteng); GMS, global mutational subtype; GMS-A, ‘universal’ with good prognosis; GMS-C, ‘African-European’ with poor prognosis; GMS-B and -D, ‘African-specific.’
Vanessa M. Hayes
https://orcid.org/0000-0002-4524-7280
Sean M. Patrick
https://orcid.org/0000-0002-0364-0068
Joyce Shirinde
https://orcid.org/0000-0002-3467-1043
Weerachai Jaratlerdsiri
https://orcid.org/0000-0001-9100-1807
Mukudeni Nenzhelele
https://orcid.org/0009-0007-4924-0098
Mulalo B. Radzuma
https://orcid.org/0009-0002-9149-0748
Kazzem Gheybi
https://orcid.org/0000-0001-8557-3649
Winstar Mokua
https://orcid.org/0000-0002-5325-2506
Micah O. Oyaro
https://orcid.org/0000-0001-5543-9983
Daniel M. Moreira
https://orcid.org/0000-0003-4517-244X
Ikenna C. Madueke
https://orcid.org/0000-0001-9319-4278
Shingai B.A. Mutambirwa
https://orcid.org/0000-0003-1414-0218
Gail S. Prins
https://orcid.org/0000-0002-9044-4734
Mungai P. Ngugi
https://orcid.org/0000-0001-9897-9613
M.S. Riana Bornman
https://orcid.org/0000-0003-3975-2333